Publications

2025

 

2024

Influence of overcooking on in vitro digestion and fermentation of ground beef and whole wheat bread. 

Ding W, Liu S, Yang Q, Bai Y, Perez-Donado CE, Rose DJ.Food Res Int. 2024 Feb;178:113953. doi: 10.1016/j.foodres.2024.113953. Epub 2024 Jan 3.PMID: 38309875 

 

2023

Root exudate concentrations of indole-3-acetic acid (IAA) and abscisic acid (ABA) affect maize rhizobacterial communities at specific developmental stages. 

Lopes LD, Futrell SL, Bergmeyer E, Hao J, Schachtman DP.FEMS Microbiol Ecol. 2023 Feb 28;99(3):fiad019. doi: 10.1093/femsec/fiad019.PMID: 36861302 

Toxicity of cadmium on dynamic human gut microbiome cultures and the protective effect of cadmium-tolerant bacteria autochthonous to the gut. 

Motta-Romero HA, Perez-Donado CE, Auchtung JM, Rose DJ.Chemosphere. 2023 Oct;338:139581. doi: 10.1016/j.chemosphere.2023.139581. Epub 2023 Jul 18.PMID: 37474038 

BOLA3 and NFU1 link mitoribosome iron-sulfur cluster assembly to multiple mitochondrial dysfunctions syndrome. 

 

2022

 

2021

 

2018

The AAA ATPase Afg1 preserves mitochondrial fidelity and cellular health by maintaining mitochondrial matrix proteostasis. Germany EM, Zahayko N, Huebsch ML, Fox JL, Prahlad V, Khalimonchuk O. J Cell Sci. 2018 Nov 21;131(22). pii: jcs219956. doi: 10.1242/jcs.219956. PMID:30301782

Commensal Escherichia coli Strains Can Promote Intestinal Inflammation via Differential Interleukin-6 Production. Kittana H, Gomes-Neto JC, Heck K, Geis AL, Segura Muñoz RR, Cody LA, Schmaltz RJ, Bindels LB, Sinha R, Hostetter JM, Benson AK, Ramer-Tait AE. Front Immunol. 2018 Oct 9;9:2318. doi: 10.3389/fimmu.2018.02318. eCollection 2018. PMID:30356663

Oral Non-Viral Gene Delivery for Applications in DNA Vaccination and Gene Therapy. Farris E, Sanderfer K, Lampe A, Brown DM, Ramer-Tait AE, Pannier AK. Curr Opin Biomed Eng. 2018 Sep;7:51-57. doi: 10.1016/j.cobme.2018.09.003. Epub 2018 Sep 26. PMID:31011691

Application of Group I Metal Adduction to the Separation of Steroids by Traveling Wave Ion Mobility Spectrometry. Rister AL, Martin TL, Dodds ED. J Am Soc Mass Spectrom. 2019 Feb;30(2):248-255. doi: 10.1007/s13361-018-2085-9. Epub 2018 Nov 9.PMID:30414066

15N CEST data and traditional model-free analysis capture fast internal dynamics of DJ-1. Catazaro J, Andrews T, Milkovic NM, Lin J, Lowe AJ, Wilson MA, Powers R. Anal Biochem. 2018 Feb 1;542:24-28. doi: 10.1016/j.ab.2017.11.012. Epub 2017 Nov 21. PMID:29169778

2017

Metalloproteases of the Inner Mitochondrial Membrane. 

Levytskyy RM, Bohovych I, Khalimonchuk O.Biochemistry. 2017 Sep 12;56(36):4737-4746. doi: 10.1021/acs.biochem.7b00663. Epub 2017 Aug 30.PMID: 28806058 

The role of interactions of long non-coding RNAs and heterogeneous nuclear ribonucleoproteins in regulating cellular functions. Sun X, Haider Ali MSS, Moran M. Biochem J. 2017 Aug 11;474(17):2925-2935. doi: 10.1042/BCJ20170280. Review. PMID:28801479

Mitochondrial dysfunction in glial cells: Implications for neuronal homeostasis and survival. Rose J, Brian C, Woods J, Pappa A, Panayiotidis MI, Powers R, Franco R. Toxicology. 2017 Nov 1;391:109-115. doi: 10.1016/j.tox.2017.06.011. Epub 2017 Jun 26. Review. PMID:28655545

The Assembly Factor Pet117 Couples Heme a Synthase Activity to Cytochrome Oxidase Assembly. Taylor NG, Swenson S, Harris NJ, Germany EM, Fox JL, Khalimonchuk O. J Biol Chem. 2017 Feb 3;292(5):1815-1825. doi: 10.1074/jbc.M116.766980. Epub 2016 Dec 20. PMID:27998984

2016

Significant role for IRF3 in both T cell and APC effector functions during T cell responses. Guinn Z, Lampe AT, Brown DM, Petro TM. Cell Immunol. 2016 Dec;310:141-149. doi: 10.1016/j.cellimm.2016.08.015. Epub 2016 Sep 4. PMID:27641636

Mitochondrial Quality Control Proteases in Neuronal Welfare. Levytskyy RM, Germany EM, Khalimonchuk O. J Neuroimmune Pharmacol. 2016 Dec;11(4):629-644. Epub 2016 May 2. Review. PMID:27137937

The Differentiation and Protective Function of Cytolytic CD4 T Cells in Influenza Infection. Brown DM, Lampe AT, Workman AM. Front Immunol. 2016 Mar 9;7:93. doi: 10.3389/fimmu.2016.00093. eCollection 2016. Review. PMID:27014272

Self-Assembling NanoLuc Luciferase Fragments as Probes for Protein Aggregation in Living Cells. Zhao J, Nelson TJ, Vu Q, Truong T, Stains CI. ACS Chem Biol. 2016 Jan 15;11(1):132-8. doi: 10.1021/acschembio.5b00758. Epub 2015 Nov 6. PMID:26492083

2014

A study of calibrant selection in measurement of carbohydrate and peptide ion-neutral collision cross sections by traveling wave ion mobility spectrometry. Gelb AS, Jarratt RE, Huang Y, Dodds ED. Anal Chem. 2014 Nov 18;86(22):11396-402. doi: 10.1021/ac503379e. Epub 2014 Nov 3. PMID:25329513